Clostridium botulinum group III genome isolated from French avian or ... - SRA

SRX1116316: Clostridium botulinum group III genome isolated from French avian or bovine botulism outbreaks
1 ILLUMINA (Illumina MiSeq) run: 589,972 spots, 264.6M bases, 126Mb downloads

Design: Library was prepared using the Nextera XT libraries kit from Illumina

Submitted by: (ANSES)

Study: Clostridium botulinum Genome sequencing and assembly

PRJNA290143 • SRP061343 • All experiments • All runs

show Abstracthide Abstract

Few Clostridium botulinum group III genomes are available in the public database. They originate from different country but none from France. In order to investigate thoroughly the genetic relationship between the strains originating from different geographical area, we sequenced seventeen strains of Clostridium botulinum group III, fourteen types C/D and three types D/C. They all originate from France, except for one type D/C which was isolated from New Caledonia.

Sample:

SAMN03876602 • SRS1009731 • All experiments • All runs

Organism: Clostridium botulinum

Library:

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Program	Version
CLC Genomic workbench	7.5.1

Runs: 1 run, 589,972 spots, 264.6M bases, 126Mb

Run	# of Spots	# of Bases	Size	Published
SRR2124884	589,972	264.6M	126Mb	2015-09-01

ID:: 1630069

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